Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_aa00380 | Not Available | Negative | 36251 - 36517 | 9818.67 |
| hypothetical protein | Rifp1Sym_aa00390 | Not Available | Positive | 36706 - 37116 | 15925.9 |
| glutamate synthase | Rifp1Sym_aa00400 | Not Available | Negative | 37176 - 38630 | 53446.5 |
| glutamate synthase | Rifp1Sym_aa00410 | Not Available | Negative | 38724 - 43349 | 168203.0 |
| hypothetical protein | Rifp1Sym_aa00420 | Not Available | Negative | 43545 - 45407 | 67424.6 |
| 3-dehydroquinate synthase | Rifp1Sym_aa00430 | Not Available | Negative | 45435 - 46523 | 39550.5 |
| shikimate kinase | Rifp1Sym_aa00440 | Not Available | Negative | 46552 - 47073 | 19441.4 |
| type iv pilus biogenesis protein pilq | Rifp1Sym_aa00450 | Not Available | Negative | 47175 - 49379 | 79667.6 |
| type iv pilus biogenesis protein pilp | Rifp1Sym_aa00460 | Not Available | Negative | 49397 - 49936 | 20305.1 |
| type iv pilus biogenesis protein pilo | Rifp1Sym_aa00470 | Not Available | Negative | 49933 - 50541 | 23092.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
