Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative arginyl-trna--protein transferase | Rifp1Sym_ai00090 | Not Available | Negative | 519047 - 519799 | 29054.5 |
| leucyl/phenylalanyl-trna--protein transferase | Rifp1Sym_ai00100 | Not Available | Negative | 519796 - 520512 | 26859.3 |
| hypothetical protein | Rifp1Sym_ai00110 | Not Available | Positive | 520628 - 521353 | 26564.0 |
| thioredoxin reductase | Rifp1Sym_ai00120 | Not Available | Negative | 521404 - 522369 | 34509.7 |
| alanine dehydrogenase | Rifp1Sym_ai00130 | Not Available | Positive | 522635 - 523723 | 38074.1 |
| dna translocase ftsk | Rifp1Sym_ai00140 | Not Available | Positive | 523756 - 526065 | 84629.2 |
| outer-membrane lipoprotein carrier protein | Rifp1Sym_ai00150 | Not Available | Positive | 526067 - 526708 | 24361.3 |
| replication-associated recombination protein a | Rifp1Sym_ai00160 | Not Available | Positive | 526705 - 528033 | 48398.8 |
| protein crcb | Rifp1Sym_ai00170 | Not Available | Positive | 528283 - 528654 | 13079.5 |
| hypothetical protein | Rifp1Sym_ai00180 | Not Available | Positive | 528651 - 528962 | 11521.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
