Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_ah00330 | Not Available | Positive | 506588 - 507178 | 21717.4 |
| cation efflux system protein cusa | Rifp1Sym_ah00340 | Not Available | Negative | 507205 - 510321 | 114463.0 |
| cation efflux system protein cusb | Rifp1Sym_ah00350 | Not Available | Negative | 510559 - 511662 | 40455.3 |
| hypothetical protein | Rifp1Sym_ai00020 | Not Available | Negative | 512451 - 512972 | 18744.7 |
| putative high frequency lysogenization protein | Rifp1Sym_ai00030 | Not Available | Negative | 513027 - 513653 | 23172.1 |
| pp_00472 | Rifp1Sym_ai00040 | Not Available | Negative | 513663 - 514808 | Not Available |
| ribosomal large subunit pseudouridine synthase e | Rifp1Sym_ai00050 | Not Available | Negative | 514757 - 515320 | 21552.1 |
| cold-shock dna-binding domain protein | Rifp1Sym_ai00060 | Not Available | Negative | 515530 - 515793 | 9683.44 |
| atp-dependent clp protease atp-binding subunit clpa | Rifp1Sym_ai00070 | Not Available | Positive | 516410 - 518659 | 83119.5 |
| translation initiation factor if-1 | Rifp1Sym_ai00080 | Not Available | Negative | 518690 - 518908 | 8296.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
