Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_af00410 | Not Available | Positive | 395541 - 397151 | 60137.8 |
| putative diguanylate cyclase | Rifp1Sym_af00420 | Not Available | Negative | 397231 - 398415 | 44674.7 |
| putative signal transduction protein | Rifp1Sym_af00430 | Not Available | Negative | 398587 - 399525 | 34201.7 |
| adp-ribose pyrophosphatase | Rifp1Sym_af00440 | Not Available | Positive | 399640 - 400320 | 26011.2 |
| quinolinate synthase a | Rifp1Sym_af00450 | Not Available | Positive | 400317 - 401417 | 39973.9 |
| acetoacetate metabolism regulatory protein atoc | Rifp1Sym_af00460 | Not Available | Negative | 401475 - 402836 | 50366.7 |
| atpase-like:histidine kinase | Rifp1Sym_af00470 | Not Available | Negative | 402829 - 403191 | 12561.1 |
| sensory transduction protein kinase | Rifp1Sym_af00480 | Not Available | Negative | 403203 - 403625 | 15949.3 |
| hypothetical protein | Rifp1Sym_af00490 | Not Available | Negative | 403529 - 404329 | 30129.5 |
| putative methylamine utilization protein | Rifp1Sym_ag00010 | Not Available | Positive | 405117 - 406223 | 40908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
