Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase b | Rifp1Sym_af00110 | Not Available | Positive | 361038 - 361526 | 17731.1 |
| udp-2,3-diacylglucosamine hydrolase | Rifp1Sym_af00120 | Not Available | Positive | 361532 - 362260 | 26909.1 |
| hypothetical protein | Rifp1Sym_af00130 | Not Available | Negative | 362264 - 362992 | 26468.1 |
| ferritin-like duf455protein | Rifp1Sym_af00140 | Not Available | Negative | 362977 - 363807 | 31344.4 |
| d-glycerate 2-kinase | Rifp1Sym_af00150 | Not Available | Negative | 363887 - 365212 | 46038.4 |
| hypothetical protein | Rifp1Sym_af00160 | Not Available | Positive | 365198 - 366124 | 34428.6 |
| hypothetical protein | Rifp1Sym_af00170 | Not Available | Positive | 366121 - 367194 | 41594.6 |
| outer membrane lipoprotein, slp family | Rifp1Sym_af00180 | Not Available | Positive | 367236 - 367772 | 20608.5 |
| outer membrane lipoprotein slp | Rifp1Sym_af00190 | Not Available | Positive | 367784 - 368305 | 18673.3 |
| putative spermidine synthase | Rifp1Sym_af00200 | Not Available | Negative | 368320 - 370746 | 87980.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
