Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin-type calcium binding protein | Rifp1Sym_gi00040 | Not Available | Positive | 3427816 - 3430872 | 110994.0 |
| glycosylhydrolase family 9 protein | Rifp1Sym_gj00010 | Not Available | Positive | 3430932 - 3434513 | 129521.0 |
| leucyl-trna synthetase | Rifp1Sym_gk00010 | Not Available | Positive | 3434945 - 3436885 | 71594.8 |
| rare lipoprotein b | Rifp1Sym_gk00030 | Not Available | Positive | 3436962 - 3437462 | 18496.3 |
| dna polymerase iii subunit delta | Rifp1Sym_gk00050 | Not Available | Positive | 3437462 - 3438481 | 37449.8 |
| sterol desaturase | Rifp1Sym_gl00020 | Not Available | Positive | 3438606 - 3438962 | 13707.3 |
| rhodanese-related sulfurtransferase pspe | Rifp1Sym_gl00040 | Not Available | Positive | 3439315 - 3439953 | 23358.7 |
| putative sulfite/sulfoacetate exporter of taurine metabolism | Rifp1Sym_gl00060 | Not Available | Positive | 3439953 - 3440735 | 26497.5 |
| dsre family protein | Rifp1Sym_gl00080 | Not Available | Positive | 3440784 - 3441128 | 12499.2 |
| hypothetical protein | Rifp1Sym_gm00020 | Not Available | Positive | 3442304 - 3442729 | 14384.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
