Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase | Rifp1Sym_ga00020 | Not Available | Positive | 3392881 - 3393849 | 38238.8 |
| hypothetical protein | Rifp1Sym_ga00030 | Not Available | Positive | 3393900 - 3394553 | 24825.5 |
| hypothetical protein | Rifp1Sym_ga00040 | Not Available | Negative | 3394589 - 3395062 | 18316.9 |
| hypothetical protein | Rifp1Sym_gb00010 | Not Available | Negative | 3395107 - 3395241 | 4757.5 |
| dna mismatch repair protein muts | Rifp1Sym_gb00020 | Not Available | Negative | 3395283 - 3396203 | 33572.9 |
| dna mismatch repair protein muts | Rifp1Sym_gb00030 | Not Available | Negative | 3396209 - 3396433 | 8937.34 |
| dna mismatch repair protein muts | Rifp1Sym_gb00040 | Not Available | Negative | 3396430 - 3397857 | 53205.1 |
| hypothetical protein | Rifp1Sym_gb00050 | Not Available | Negative | 3398015 - 3398332 | 12098.7 |
| hypothetical protein | Rifp1Sym_gc00010 | Not Available | Negative | 3399900 - 3400148 | 9061.87 |
| phosphatidylserine decarboxylase proenzyme | Rifp1Sym_gc00020 | Not Available | Positive | 3400245 - 3400970 | 27086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
