Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_fs00050 | Not Available | Negative | 3354285 - 3355316 | 36718.7 |
| hypothetical protein | Rifp1Sym_fs00060 | Not Available | Negative | 3355343 - 3355954 | 21291.8 |
| ybak/prolyl-trna synthetase associated region | Rifp1Sym_ft00010 | Not Available | Negative | 3356165 - 3356731 | 20929.2 |
| methyltransferase type 11 | Rifp1Sym_ft00020 | Not Available | Positive | 3356836 - 3357498 | 24386.4 |
| protein-l-isoaspartate o-methyltransferase 2 | Rifp1Sym_ft00030 | Not Available | Negative | 3357775 - 3358461 | 25442.5 |
| hypothetical protein | Rifp1Sym_fu00010 | Not Available | Positive | 3361149 - 3361817 | 23612.1 |
| ribose-phosphate pyrophosphokinase | Rifp1Sym_fu00020 | Not Available | Negative | 3361826 - 3362779 | 34302.3 |
| Trna-gln | Not Available | Not Available | Positive | 3362883 - 3362957 | Not Available |
| tpr repeat-containing protein | Rifp1Sym_fu00030 | Not Available | Negative | 3363809 - 3365566 | 64807.2 |
| Trna-tyr | Not Available | Not Available | Positive | 3365824 - 3365908 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
