Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_fn00050 | Not Available | Negative | 3328768 - 3329037 | 10165.3 |
| hypothetical protein | Rifp1Sym_fn00060 | Not Available | Negative | 3329034 - 3329138 | 3868.0 |
| putative transposase | Rifp1Sym_fn00070 | Not Available | Positive | 3329210 - 3329935 | 27605.8 |
| 3-isopropylmalate dehydrogenase | Rifp1Sym_fo00010 | Not Available | Positive | 3330172 - 3331251 | 38632.9 |
| aspartate-semialdehyde dehydrogenase | Rifp1Sym_fo00020 | Not Available | Positive | 3331305 - 3331916 | 22113.7 |
| aspartate-semialdehyde dehydrogenase | Rifp1Sym_fo00030 | Not Available | Positive | 3331979 - 3332365 | 13887.6 |
| aspartate-semialdehyde dehydrogenase | Rifp1Sym_fo00040 | Not Available | Positive | 3332362 - 3332469 | 4006.9 |
| aspartate-semialdehyde dehydrogenase | Rifp1Sym_fo00050 | Not Available | Positive | 3332552 - 3333580 | 36514.4 |
| signal recognition particle protein | Rifp1Sym_fp00010 | Not Available | Negative | 3335339 - 3336487 | 41461.1 |
| cytochrome c assembly protein | Rifp1Sym_fp00020 | Not Available | Positive | 3336692 - 3337462 | 27728.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
