Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase | Rifp1Sym_fi00020 | Not Available | Negative | 3297155 - 3297814 | 23743.7 |
| transcription termination factor rho | Rifp1Sym_fi00030 | Not Available | Negative | 3297911 - 3299236 | 49565.1 |
| thioredoxin | Rifp1Sym_fi00040 | Not Available | Negative | 3299350 - 3299721 | 13476.2 |
| atp-dependent rna helicase rhlb | Rifp1Sym_fi00050 | Not Available | Positive | 3299730 - 3301232 | 55812.5 |
| hypothetical protein | Rifp1Sym_fi00060 | Not Available | Positive | 3301238 - 3301600 | 13983.4 |
| protein phosphatase prpc | Rifp1Sym_fj00010 | Not Available | Negative | 3302971 - 3303795 | 29528.0 |
| thiol:disulfide interchange protein dsbc | Rifp1Sym_fj00020 | Not Available | Negative | 3303889 - 3304644 | 27838.0 |
| hypothetical protein | Rifp1Sym_fj00030 | Not Available | Negative | 3304648 - 3305178 | 20404.4 |
| tyrosine recombinase xerd | Rifp1Sym_fj00040 | Not Available | Negative | 3305227 - 3306132 | 33991.3 |
| methylated-dna-(protein)-cysteine s-methyltransferase | Rifp1Sym_fj00050 | Not Available | Negative | 3306129 - 3306605 | 17360.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
