Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | Rifp1Sym_fe00070 | Not Available | Negative | 3277731 - 3278423 | 25052.8 |
| 6-phosphofructokinase | Rifp1Sym_fe00080 | Not Available | Negative | 3278420 - 3278986 | 20322.0 |
| Trna-ile | Not Available | Not Available | Positive | 3281179 - 3281255 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3281268 - 3281343 | Not Available |
| Tmrna,resume consensus sequence (at 86): tatagttgccaacgacga | Not Available | Not Available | Positive | 3285197 - 3285572 | Not Available |
| hypothetical protein | Rifp1Sym_fg00010 | Not Available | Negative | 3285700 - 3285801 | 3806.93 |
| ssra-binding protein | Rifp1Sym_fg00020 | Not Available | Negative | 3286074 - 3286559 | 18287.3 |
| sodium-dependent transporter family protein | Rifp1Sym_fg00030 | Not Available | Positive | 3286651 - 3288078 | 51223.9 |
| putative oligoketide cyclase/lipid transport protein | Rifp1Sym_fg00040 | Not Available | Positive | 3288081 - 3288515 | 16589.8 |
| hypothetical protein | Rifp1Sym_fg00050 | Not Available | Positive | 3288496 - 3288816 | 11939.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
