Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminotransferase, degt/dnrj/eryc1/strs family | Rifp1Sym_ex00050 | Not Available | Negative | 3227292 - 3227897 | 21394.8 |
| putative ubiquinone biosynthesis protein ubib | Rifp1Sym_ex00060 | Not Available | Negative | 3227927 - 3229585 | 63274.1 |
| sterol-binding domain protein | Rifp1Sym_ex00070 | Not Available | Negative | 3229582 - 3230265 | 25082.8 |
| ubiquinone/menaquinone biosynthesis methyltransferase ubie | Rifp1Sym_ex00080 | Not Available | Negative | 3230234 - 3231253 | 38492.7 |
| murein l,d-transpeptidase | Rifp1Sym_ey00010 | Not Available | Negative | 3231289 - 3232965 | 63711.3 |
| lysyl-trna synthetase-related protein | Rifp1Sym_ey00020 | Not Available | Negative | 3233041 - 3234033 | 36807.1 |
| elongation factor p | Rifp1Sym_ey00030 | Not Available | Negative | 3234030 - 3234641 | 22299.5 |
| lysine 2,3-aminomutase | Rifp1Sym_ey00040 | Not Available | Positive | 3234601 - 3235644 | 38065.0 |
| transporter of nadc family protein | Rifp1Sym_ey00050 | Not Available | Positive | 3235786 - 3237336 | 56557.1 |
| beta-lactamase-like protein | Rifp1Sym_ey00060 | Not Available | Positive | 3237350 - 3238321 | 35659.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
