Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf140 | Rifp1Sym_eu00050 | Not Available | Negative | 3202656 - 3203825 | 41619.3 |
| putative histidine kinase with protein phosphatase region | Rifp1Sym_eu00060 | Not Available | Positive | 3203948 - 3205690 | 64070.8 |
| hypothetical protein | Rifp1Sym_ev00010 | Not Available | Negative | 3208194 - 3208652 | 17070.8 |
| hypothetical protein | Rifp1Sym_ev00020 | Not Available | Positive | 3209720 - 3209947 | 8385.06 |
| putative type i site-specific deoxyribonuclease lldi chain | Rifp1Sym_ev00030 | Not Available | Positive | 3209898 - 3210269 | 14236.6 |
| putative type i restriction-modification system, m subunit | Rifp1Sym_ev00040 | Not Available | Positive | 3210285 - 3212699 | 91709.0 |
| putative ski2-type helicase | Rifp1Sym_ev00050 | Not Available | Positive | 3212696 - 3214528 | 67842.7 |
| putative hydroxylamine oxidoreductase hao | Rifp1Sym_ew00010 | Not Available | Negative | 3216931 - 3217758 | 31185.9 |
| hydroxylamine oxidoreductase | Rifp1Sym_ew00020 | Not Available | Negative | 3217755 - 3219101 | 50922.6 |
| hypothetical protein | Rifp1Sym_ew00030 | Not Available | Negative | 3219094 - 3219633 | 20402.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
