Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3194679 - 3194755 | Not Available |
| protein-l-isoaspartate o-methyltransferase | Rifp1Sym_et00040 | Not Available | Negative | 3194867 - 3195523 | 23728.6 |
| uvrabc system protein b | Rifp1Sym_et00050 | Not Available | Negative | 3195692 - 3197698 | 75837.1 |
| aspartate aminotransferase | Rifp1Sym_et00060 | Not Available | Positive | 3197808 - 3198992 | 42253.6 |
| type 4 fimbrial biogenesis protein fimt | Rifp1Sym_et00070 | Not Available | Positive | 3199070 - 3199633 | 20597.8 |
| Trna-asn | Not Available | Not Available | Positive | 3199698 - 3199773 | Not Available |
| putative lipoprotein | Rifp1Sym_eu00010 | Not Available | Negative | 3200179 - 3200748 | 20676.9 |
| hypothetical protein | Rifp1Sym_eu00020 | Not Available | Positive | 3200720 - 3200812 | 3187.97 |
| paraquat-inducible protein b | Rifp1Sym_eu00030 | Not Available | Negative | 3200796 - 3201839 | 38168.3 |
| putative ribonucleotide transport atp-binding protein mkl | Rifp1Sym_eu00040 | Not Available | Negative | 3201871 - 3202656 | 28742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
