Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycyl-trna synthetase alpha subunit | Rifp1Sym_ae00110 | Not Available | Positive | 302489 - 303424 | 35284.7 |
| glycyl-trna synthetase beta subunit | Rifp1Sym_ae00120 | Not Available | Positive | 303345 - 305495 | 80678.0 |
| hypothetical protein | Rifp1Sym_ae00130 | Not Available | Positive | 305509 - 305853 | 12943.6 |
| d,d-heptose 1,7-bisphosphate phosphatase | Rifp1Sym_ae00140 | Not Available | Positive | 305850 - 306389 | 19705.5 |
| phospholipid/glycerol acyltransferase | Rifp1Sym_ae00150 | Not Available | Positive | 306405 - 307133 | 26966.0 |
| dna gyrase subunit b | Rifp1Sym_ae00160 | Not Available | Negative | 307167 - 309578 | 89851.1 |
| transposase | Rifp1Sym_ae00170 | Not Available | Positive | 313535 - 313705 | 6704.29 |
| hypothetical protein | Rifp1Sym_ae00180 | Not Available | Positive | 314375 - 314488 | 4243.15 |
| dna polymerase iii subunit beta | Rifp1Sym_ae00190 | Not Available | Negative | 314738 - 315850 | 42287.3 |
| chromosomal replication initiator protein dnaa | Rifp1Sym_ae00200 | Not Available | Negative | 316028 - 317371 | 50952.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
