Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemx family protein | Rifp1Sym_aa00180 | Not Available | Negative | 17262 - 18491 | 46243.2 |
| uroporphyrinogen-iii synthase | Rifp1Sym_aa00190 | Not Available | Negative | 18481 - 19368 | 31827.7 |
| porphobilinogen deaminase | Rifp1Sym_aa00200 | Not Available | Negative | 19280 - 20302 | 37021.5 |
| cytochrome subunit of sulfide dehydrogenase | Rifp1Sym_aa00210 | Not Available | Negative | 20343 - 21125 | 28397.2 |
| hypothetical protein | Rifp1Sym_aa00220 | Not Available | Positive | 21171 - 21731 | 20746.3 |
| putative adsorption protein | Rifp1Sym_aa00230 | Not Available | Negative | 21851 - 22855 | 36289.6 |
| response regulator of the lytr/algr family | Rifp1Sym_aa00240 | Not Available | Negative | 23049 - 23789 | 27501.5 |
| sensor histidine kinase fims | Rifp1Sym_aa00250 | Not Available | Negative | 23774 - 24985 | 45266.8 |
| argininosuccinate lyase | Rifp1Sym_aa00260 | Not Available | Positive | 24906 - 26300 | 51290.0 |
| putative mazg type nucleotide pyrophosphohydrolase | Rifp1Sym_aa00270 | Not Available | Positive | 26297 - 26671 | 14391.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
