Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase, family 3 | Rifp1Sym_es00020 | Not Available | Positive | 3184566 - 3185108 | 19234.0 |
| shikimate dehydrogenase | Rifp1Sym_es00030 | Not Available | Negative | 3185129 - 3185944 | 29383.1 |
| delta-aminolevulinic acid dehydratase | Rifp1Sym_es00040 | Not Available | Negative | 3185955 - 3186965 | 36739.8 |
| thioredoxin domain protein | Rifp1Sym_es00050 | Not Available | Positive | 3187042 - 3187425 | 14707.5 |
| putative ribosome maturation factor rimn | Rifp1Sym_es00060 | Not Available | Negative | 3188033 - 3188626 | 21293.0 |
| phosphoribosylaminoimidazole carboxylase catalytic subunit | Rifp1Sym_es00070 | Not Available | Negative | 3188595 - 3189101 | 17332.2 |
| extracellular solute-binding protein, family 3 | Rifp1Sym_es00080 | Not Available | Positive | 3189280 - 3190851 | 58912.4 |
| abc-type transport system involved in resistance to toluene | Rifp1Sym_es00090 | Not Available | Positive | 3191118 - 3191735 | 23933.0 |
| glucose-1-phosphate thymidylyltransferase | Rifp1Sym_et00020 | Not Available | Negative | 3192531 - 3193406 | 32478.9 |
| dtdp-glucose 4,6-dehydratase | Rifp1Sym_et00030 | Not Available | Negative | 3193407 - 3194492 | 40729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
