Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas5, dvulg subtype | Rifp1Sym_ep00060 | Not Available | Negative | 3163069 - 3163776 | 27433.9 |
| crispr-associated helicase cas3 domain protein | Rifp1Sym_ep00070 | Not Available | Negative | 3163788 - 3166334 | 95552.6 |
| pas sensor diguanylate cyclase and phosphodiesterase | Rifp1Sym_eq00010 | Not Available | Positive | 3166429 - 3166689 | 9572.51 |
| trap transporter solute receptor, taxi family protein | Rifp1Sym_eq00020 | Not Available | Positive | 3166783 - 3167742 | 34693.7 |
| putative trap transporter, fused permease component | Rifp1Sym_eq00030 | Not Available | Positive | 3167938 - 3170370 | 87565.9 |
| hypothetical protein | Rifp1Sym_eq00040 | Not Available | Positive | 3170367 - 3170837 | 17131.8 |
| asma protein | Rifp1Sym_eq00050 | Not Available | Positive | 3170879 - 3173980 | 110796.0 |
| c_gcaxxg_c_c family protein | Rifp1Sym_eq00060 | Not Available | Positive | 3174105 - 3174647 | 19627.4 |
| cellulose-binding domain protein | Rifp1Sym_er00010 | Not Available | Positive | 3175018 - 3183504 | 312527.0 |
| protein lema | Rifp1Sym_es00010 | Not Available | Negative | 3183967 - 3184539 | 21414.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
