Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_eo00030 | Not Available | Negative | 3151787 - 3152692 | 33231.0 |
| putative protease | Rifp1Sym_eo00040 | Not Available | Negative | 3152714 - 3153709 | 36442.9 |
| hypothetical protein | Rifp1Sym_eo00050 | Not Available | Negative | 3153777 - 3154688 | 33549.1 |
| radical sam domain protein | Rifp1Sym_eo00060 | Not Available | Negative | 3154692 - 3155291 | 22159.5 |
| putative signal transduction protein | Rifp1Sym_eo00070 | Not Available | Negative | 3155940 - 3157439 | 55149.1 |
| crispr-associated protein cas2 | Rifp1Sym_ep00010 | Not Available | Negative | 3157872 - 3158162 | 11261.5 |
| crispr-associated protein cas1 | Rifp1Sym_ep00020 | Not Available | Negative | 3158177 - 3159211 | 38234.4 |
| crispr-associated recb family exonuclease cas4b | Rifp1Sym_ep00030 | Not Available | Negative | 3159208 - 3159855 | 24605.4 |
| crispr-associated protein, csd2 family | Rifp1Sym_ep00040 | Not Available | Negative | 3160235 - 3161077 | 30745.0 |
| crispr-associated protein, csd1 family | Rifp1Sym_ep00050 | Not Available | Negative | 3161078 - 3163072 | 75599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
