Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyltransferase | Rifp1Sym_em00040 | Not Available | Positive | 3137604 - 3138233 | 24256.5 |
| hypothetical protein | Rifp1Sym_em00050 | Not Available | Negative | 3138316 - 3138906 | 22061.5 |
| hypothetical protein | Rifp1Sym_em00060 | Not Available | Negative | 3139020 - 3139637 | 22956.9 |
| rna polymerase, sigma-24 subunit, ecf subfamily | Rifp1Sym_em00070 | Not Available | Negative | 3139624 - 3140007 | 14841.6 |
| inosine-5'-monophosphate dehydrogenase | Rifp1Sym_en00020 | Not Available | Negative | 3141822 - 3143360 | 54863.8 |
| signal transduction histidine-protein kinase bara | Rifp1Sym_en00030 | Not Available | Positive | 3143528 - 3145642 | 78821.8 |
| exodeoxyribonuclease 7 large subunit | Rifp1Sym_en00040 | Not Available | Positive | 3145513 - 3147123 | 61001.5 |
| atp-dependent protease la type ii | Rifp1Sym_en00050 | Not Available | Negative | 3147133 - 3148866 | 64513.7 |
| hypothetical protein | Rifp1Sym_eo00010 | Not Available | Positive | 3148905 - 3150911 | 68345.6 |
| glutamate racemase | Rifp1Sym_eo00020 | Not Available | Negative | 3150936 - 3151730 | 28710.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
