Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase c | Rifp1Sym_ek00100 | Not Available | Positive | 3120506 - 3121267 | 29292.7 |
| plasmid maintenance system killer | Rifp1Sym_el00010 | Not Available | Positive | 3122001 - 3122312 | 12107.5 |
| plasmid maintenance system antidote protein, xre family | Rifp1Sym_el00020 | Not Available | Positive | 3122325 - 3122621 | 11354.8 |
| zinc finger chc2-family protein | Rifp1Sym_el00030 | Not Available | Negative | 3122889 - 3124364 | 55981.0 |
| putative bacteriophage protein | Rifp1Sym_el00040 | Not Available | Negative | 3124306 - 3125166 | 31141.8 |
| zinc finger chc2-family protein | Rifp1Sym_el00050 | Not Available | Negative | 3125270 - 3125650 | 14107.7 |
| hypothetical protein | Rifp1Sym_el00060 | Not Available | Negative | 3125702 - 3125887 | 7194.56 |
| hypothetical protein | Rifp1Sym_el00070 | Not Available | Negative | 3125884 - 3126192 | 11347.3 |
| site-specific recombinase xerc | Rifp1Sym_el00080 | Not Available | Negative | 3126297 - 3126899 | 23532.5 |
| hypothetical protein | Rifp1Sym_el00090 | Not Available | Negative | 3126896 - 3127282 | 14072.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
