Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_eh00040 | Not Available | Positive | 3087141 - 3093170 | 225908.0 |
| hypothetical protein | Rifp1Sym_eh00050 | Not Available | Negative | 3093970 - 3094074 | 3546.42 |
| crispr-associated protein cas1 | Rifp1Sym_ei00010 | Not Available | Negative | 3094548 - 3095459 | 33105.5 |
| hypothetical protein | Rifp1Sym_ei00020 | Not Available | Negative | 3095747 - 3095971 | 8335.84 |
| crispr-associated protein cse3 | Rifp1Sym_ei00030 | Not Available | Negative | 3095995 - 3096672 | 25943.1 |
| crispr-associated protein, ct1976 | Rifp1Sym_ei00040 | Not Available | Negative | 3096608 - 3097432 | 30108.9 |
| crispr-associated protein, ct1975 family | Rifp1Sym_ei00050 | Not Available | Negative | 3097436 - 3098539 | 40089.6 |
| hypothetical protein | Rifp1Sym_ei00060 | Not Available | Negative | 3098647 - 3099123 | 18449.3 |
| crispr-associated protein, cse1 family | Rifp1Sym_ei00070 | Not Available | Negative | 3099410 - 3100810 | 51260.0 |
| crispr-associated helicase cas3 | Rifp1Sym_ei00080 | Not Available | Negative | 3100699 - 3103422 | 101823.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
