Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | Rifp1Sym_ed00060 | Not Available | Positive | 3050573 - 3052768 | 82353.5 |
| hypothetical protein | Rifp1Sym_ed00070 | Not Available | Negative | 3052797 - 3053396 | 22811.4 |
| endoribonuclease l-psp, putative | Rifp1Sym_ed00080 | Not Available | Positive | 3053516 - 3053902 | 13790.6 |
| putative trap-type transporter, periplasmic component (taxi family protein) | Rifp1Sym_ed00090 | Not Available | Positive | 3053934 - 3054977 | 37604.2 |
| general secretion pathway protein f | Rifp1Sym_ee00010 | Not Available | Negative | 3056011 - 3057216 | 44974.6 |
| general secretion pathway protein e | Rifp1Sym_ee00020 | Not Available | Negative | 3057541 - 3058023 | 17724.4 |
| general secretion pathway protein e | Rifp1Sym_ee00030 | Not Available | Negative | 3058020 - 3059258 | 45993.9 |
| hypothetical protein | Rifp1Sym_ee00040 | Not Available | Negative | 3059252 - 3059623 | 14057.7 |
| hypothetical protein | Rifp1Sym_ee00050 | Not Available | Positive | 3059913 - 3060533 | 22438.0 |
| putative type ii secretory pathway component puld | Rifp1Sym_ee00060 | Not Available | Negative | 3060645 - 3062288 | 59276.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
