Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid ac-diamide synthase | Rifp1Sym_ec00080 | Not Available | Negative | 3039340 - 3040083 | 28024.4 |
| hypothetical protein | Rifp1Sym_ec00090 | Not Available | Negative | 3040088 - 3041794 | 64777.0 |
| bifunctional protein fold | Rifp1Sym_ec00100 | Not Available | Negative | 3041925 - 3042797 | 31202.0 |
| hypothetical protein | Rifp1Sym_ec00110 | Not Available | Negative | 3043509 - 3044831 | 48886.9 |
| hypothetical protein | Rifp1Sym_ec00120 | Not Available | Negative | 3044828 - 3045445 | 23750.1 |
| peptidase m61 domain protein | Rifp1Sym_ed00010 | Not Available | Positive | 3045514 - 3047334 | 67784.9 |
| bifunctional protein bira | Rifp1Sym_ed00020 | Not Available | Positive | 3047488 - 3048477 | 36091.3 |
| type iii pantothenate kinase | Rifp1Sym_ed00030 | Not Available | Positive | 3048481 - 3049224 | 26198.5 |
| hypothetical protein | Rifp1Sym_ed00040 | Not Available | Positive | 3049221 - 3050126 | 32896.3 |
| dna-directed rna polymerase subunit omega | Rifp1Sym_ed00050 | Not Available | Positive | 3050212 - 3050475 | 9606.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
