Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metallo-hydrolase | Rifp1Sym_dz00090 | Not Available | Negative | 3013096 - 3013869 | 27825.3 |
| putative lipoprotein | Rifp1Sym_dz00100 | Not Available | Negative | 3013892 - 3014671 | 29929.3 |
| phosphoribosylglycinamide formyltransferase 2 | Rifp1Sym_ea00010 | Not Available | Negative | 3015006 - 3016208 | 43496.1 |
| serine/threonine protein kinase | Rifp1Sym_ea00020 | Not Available | Negative | 3016539 - 3017981 | 53430.2 |
| putative serine/threonine-protein kinase | Rifp1Sym_ea00030 | Not Available | Negative | 3017969 - 3018916 | 35163.8 |
| hypothetical protein | Rifp1Sym_ea00040 | Not Available | Negative | 3019076 - 3019507 | 15044.2 |
| coenzyme f420 hydrogenase, subunit alpha | Rifp1Sym_ea00050 | Not Available | Negative | 3019507 - 3019812 | 11444.8 |
| coenzyme f420 hydrogenase, subunit alpha | Rifp1Sym_ea00060 | Not Available | Negative | 3019701 - 3020813 | 41050.9 |
| coenzyme f420-reducing hydrogenase, gamma subunit | Rifp1Sym_ea00070 | Not Available | Negative | 3020810 - 3021610 | 28458.3 |
| anaerobic sulfite reductase subunit b | Rifp1Sym_ea00080 | Not Available | Negative | 3021607 - 3022449 | 31996.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
