Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine catabolism dioxygenase | Rifp1Sym_dy00120 | Not Available | Negative | 3002495 - 3003424 | 35404.2 |
| sterol-binding domain protein | Rifp1Sym_dy00130 | Not Available | Positive | 3003375 - 3003944 | 21229.2 |
| abc transporter, atp-binding protein | Rifp1Sym_dz00010 | Not Available | Negative | 3004516 - 3006489 | 73458.7 |
| tryptophan synthase beta chain 2 | Rifp1Sym_dz00020 | Not Available | Positive | 3006539 - 3007888 | 48677.1 |
| transcriptional regulator crp/fnr | Rifp1Sym_dz00030 | Not Available | Positive | 3007982 - 3008689 | 26546.8 |
| hypothetical protein | Rifp1Sym_dz00040 | Not Available | Positive | 3008769 - 3009245 | 17835.5 |
| nitrogen fixation-related protein | Rifp1Sym_dz00050 | Not Available | Positive | 3009242 - 3009625 | 14098.8 |
| protein of unknown function duf336 | Rifp1Sym_dz00060 | Not Available | Negative | 3009634 - 3010134 | 17053.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | Rifp1Sym_dz00070 | Not Available | Negative | 3010280 - 3011506 | 43478.4 |
| sulfide-quinone reductase | Rifp1Sym_dz00080 | Not Available | Negative | 3011637 - 3012944 | 48490.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
