Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tfp pilus assembly protein fimv | Rifp1Sym_dy00020 | Not Available | Positive | 2993566 - 2994483 | 32119.9 |
| trna pseudouridine synthase a | Rifp1Sym_dy00030 | Not Available | Positive | 2994422 - 2995318 | 33996.4 |
| n-(5'-phosphoribosyl)anthranilate isomerase | Rifp1Sym_dy00040 | Not Available | Positive | 2995360 - 2995986 | 22079.4 |
| tryptophan synthase beta chain | Rifp1Sym_dy00050 | Not Available | Positive | 2995970 - 2997187 | 43752.3 |
| tryptophan synthase alpha chain | Rifp1Sym_dy00060 | Not Available | Positive | 2997184 - 2997990 | 28214.1 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | Rifp1Sym_dy00070 | Not Available | Positive | 2998042 - 2998902 | 31717.6 |
| bifunctional protein folc | Rifp1Sym_dy00080 | Not Available | Positive | 2998918 - 3000189 | 45199.4 |
| argininosuccinate synthase | Rifp1Sym_dy00090 | Not Available | Positive | 3000254 - 3000793 | 19966.6 |
| general secretion pathway protein c | Rifp1Sym_dy00100 | Not Available | Positive | 3000815 - 3001750 | 34178.9 |
| protein of unknown function duf971 | Rifp1Sym_dy00110 | Not Available | Negative | 3001761 - 3002447 | 25923.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
