Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic thiol:disulfide interchange protein dsba | Rifp1Sym_dv00100 | Not Available | Positive | 2969051 - 2969902 | 31429.1 |
| hypothetical protein | Rifp1Sym_dw00010 | Not Available | Positive | 2971424 - 2971810 | 14632.0 |
| hypothetical protein | Rifp1Sym_dw00020 | Not Available | Positive | 2971838 - 2972104 | 9301.23 |
| putative activity regulator of membrane protease ybbk | Rifp1Sym_dw00030 | Not Available | Negative | 2972324 - 2972587 | 9629.14 |
| putative stomatin/prohibitin-family membrane protease subunit ybbk | Rifp1Sym_dw00040 | Not Available | Negative | 2972587 - 2972979 | 14018.8 |
| putative stomatin/prohibitin-family membrane protease subunit ybbk | Rifp1Sym_dw00050 | Not Available | Negative | 2972976 - 2973503 | 19389.8 |
| trna 2-thiocytidine biosynthesis protein ttca | Rifp1Sym_dw00060 | Not Available | Positive | 2973540 - 2974160 | 23232.0 |
| putative trna 2-thiocytidine biosynthesis protein ttca | Rifp1Sym_dw00070 | Not Available | Positive | 2974165 - 2974350 | 6907.53 |
| hypothetical protein | Rifp1Sym_dw00080 | Not Available | Positive | 2974347 - 2974808 | 16945.4 |
| na+/h+ transporter nhad | Rifp1Sym_dw00090 | Not Available | Positive | 2974793 - 2976124 | 47766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
