Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_ds00060 | Not Available | Negative | 2925427 - 2925987 | 19279.2 |
| hypothetical protein | Rifp1Sym_ds00070 | Not Available | Negative | 2926018 - 2926602 | 21513.7 |
| hypothetical protein | Rifp1Sym_ds00080 | Not Available | Negative | 2926817 - 2926936 | 4419.28 |
| hypothetical protein | Rifp1Sym_ds00090 | Not Available | Negative | 2926822 - 2927727 | 32416.8 |
| hypothetical protein | Rifp1Sym_ds00100 | Not Available | Negative | 2927824 - 2928810 | 36760.5 |
| signal transduction histidine-protein kinase atos | Rifp1Sym_ds00110 | Not Available | Positive | 2929136 - 2931280 | 79004.1 |
| hdod domain family | Rifp1Sym_ds00120 | Not Available | Positive | 2931284 - 2931697 | 15492.8 |
| response regulator receiver modulated metal dependent phosphohydrolase | Rifp1Sym_ds00130 | Not Available | Positive | 2931667 - 2932497 | 29590.8 |
| signaling protein | Rifp1Sym_ds00140 | Not Available | Negative | 2932504 - 2934066 | 58454.4 |
| urease accessory protein ureh | Rifp1Sym_dt00020 | Not Available | Negative | 2934950 - 2935669 | 25572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
