Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein zrar | Rifp1Sym_dq00090 | Not Available | Positive | 2908270 - 2909658 | 51088.2 |
| pp_02687 | Rifp1Sym_dr00010 | Not Available | Positive | 2910416 - 2911405 | Not Available |
| hypothetical protein | Rifp1Sym_dr00020 | Not Available | Positive | 2911432 - 2912301 | 31595.2 |
| hypothetical protein | Rifp1Sym_dr00030 | Not Available | Negative | 2912308 - 2912646 | 12653.2 |
| hypothetical protein | Rifp1Sym_dr00040 | Not Available | Negative | 2912684 - 2914261 | 59491.5 |
| hypothetical protein | Rifp1Sym_dr00050 | Not Available | Positive | 2914364 - 2914579 | 7597.38 |
| hypothetical protein | Rifp1Sym_dr00060 | Not Available | Negative | 2914576 - 2914740 | 6089.48 |
| ribosomal protein s12 methylthiotransferase rimo | Rifp1Sym_dr00070 | Not Available | Negative | 2914790 - 2916115 | 48774.5 |
| putative thioredoxin protein | Rifp1Sym_dr00080 | Not Available | Negative | 2916127 - 2916990 | 32442.0 |
| hypothetical protein | Rifp1Sym_dr00090 | Not Available | Negative | 2916987 - 2917319 | 12115.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
