Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | Rifp1Sym_dp00080 | Not Available | Negative | 2892185 - 2894173 | 71281.9 |
| ahpc/tsa family protein | Rifp1Sym_dp00090 | Not Available | Negative | 2894500 - 2895159 | 24306.0 |
| s-adenosylmethionine synthase | Rifp1Sym_dp00100 | Not Available | Positive | 2895226 - 2896398 | 42231.2 |
| transcriptional regulator, arsr family | Rifp1Sym_dq00020 | Not Available | Positive | 2898139 - 2898801 | 24408.2 |
| anaerobic dimethyl sulfoxide reductase, a subunit, dmsa/ynfe family | Rifp1Sym_dq00030 | Not Available | Negative | 2900359 - 2902881 | 93081.0 |
| tetrathionate reductase, subunit b | Rifp1Sym_dq00040 | Not Available | Negative | 2902914 - 2903765 | 31125.6 |
| cytochrome c, napc/nirt family | Rifp1Sym_dq00050 | Not Available | Negative | 2903830 - 2905356 | 56535.5 |
| phosphonate abc transporter phosphate-binding periplasmic component | Rifp1Sym_dq00060 | Not Available | Positive | 2905913 - 2906782 | 33178.2 |
| signal transduction histidine kinase | Rifp1Sym_dq00070 | Not Available | Positive | 2906796 - 2907572 | 28141.9 |
| signal transduction histidine kinase | Rifp1Sym_dq00080 | Not Available | Positive | 2907584 - 2908270 | 25321.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
