Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyl-sulfate kinase | Rifp1Sym_dn00130 | Not Available | Positive | 2870560 - 2871174 | 22936.3 |
| peptidase c14, caspase catalytic subunit p20 | Rifp1Sym_do00010 | Not Available | Negative | 2871452 - 2871877 | 15497.7 |
| peptidase c14, caspase catalytic subunit p20 | Rifp1Sym_do00020 | Not Available | Negative | 2871887 - 2872984 | 40694.7 |
| zn-dependent metalloprotease, sprt family | Rifp1Sym_do00030 | Not Available | Negative | 2873170 - 2873667 | 19109.2 |
| nadh-ubiquinone oxidoreductase chain m | Rifp1Sym_do00040 | Not Available | Negative | 2873664 - 2874761 | 39178.2 |
| proton-translocating nadh-quinone oxidoreductase, chain m | Rifp1Sym_do00050 | Not Available | Negative | 2874734 - 2875180 | 16331.3 |
| nadh-ubiquinone oxidoreductase chain m | Rifp1Sym_do00060 | Not Available | Negative | 2875247 - 2876764 | 54906.0 |
| nadh-quinone oxidoreductase subunit l | Rifp1Sym_do00070 | Not Available | Negative | 2876777 - 2878051 | 46519.8 |
| hypothetical protein | Rifp1Sym_do00080 | Not Available | Negative | 2878036 - 2878368 | 11915.8 |
| hypothetical protein | Rifp1Sym_do00090 | Not Available | Negative | 2878361 - 2880583 | 84587.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
