Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate oxidoreductase, beta subunit | Rifp1Sym_dm00070 | Not Available | Negative | 2850592 - 2851590 | 36744.5 |
| 2-oxoglutarate oxidoreductase, alpha subunit | Rifp1Sym_dm00080 | Not Available | Negative | 2851587 - 2852759 | 42408.1 |
| putative 2-oxoglutarate oxidoreductase, delta subunit | Rifp1Sym_dm00090 | Not Available | Negative | 2852746 - 2853006 | 9629.38 |
| heterodisulfide reductase subunit b | Rifp1Sym_dm00100 | Not Available | Negative | 2853590 - 2853895 | 11505.0 |
| heterodisulfide reductase subunit c | Rifp1Sym_dm00110 | Not Available | Negative | 2853903 - 2854310 | 15080.7 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | Rifp1Sym_dm00120 | Not Available | Negative | 2854351 - 2856084 | 63126.5 |
| ferredoxin | Rifp1Sym_dm00130 | Not Available | Negative | 2856130 - 2856996 | 31110.5 |
| putative ompa/motb domain outer membrane protein | Rifp1Sym_dm00140 | Not Available | Negative | 2857225 - 2857782 | 20399.6 |
| hypothetical protein | Rifp1Sym_dn00010 | Not Available | Negative | 2857860 - 2858852 | 36857.2 |
| uroporphyrinogen decarboxylase | Rifp1Sym_dn00020 | Not Available | Positive | 2858995 - 2860086 | 40128.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
