Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding region, atpase-like protein | Rifp1Sym_dk00070 | Not Available | Negative | 2818690 - 2820450 | 65068.9 |
| putative transporter | Rifp1Sym_dk00080 | Not Available | Positive | 2820505 - 2822790 | 87549.6 |
| valyl-trna synthetase | Rifp1Sym_dk00090 | Not Available | Positive | 2822745 - 2823341 | 22185.7 |
| hypothetical protein | Rifp1Sym_dk00100 | Not Available | Positive | 2823496 - 2824644 | 42252.4 |
| hypothetical protein | Rifp1Sym_dk00110 | Not Available | Positive | 2824796 - 2825626 | 31889.7 |
| hypothetical protein | Rifp1Sym_dk00120 | Not Available | Negative | 2825685 - 2826173 | 17697.9 |
| ferredoxin-dependent glutamate synthase | Rifp1Sym_dk00130 | Not Available | Negative | 2826586 - 2827827 | 44337.6 |
| atp-dependent protease atpase subunit hslu | Rifp1Sym_dl00010 | Not Available | Negative | 2828978 - 2830318 | 49650.2 |
| atp-dependent protease subunit hslv | Rifp1Sym_dl00020 | Not Available | Negative | 2830325 - 2830870 | 19452.4 |
| tyrosine recombinase xerc | Rifp1Sym_dl00030 | Not Available | Negative | 2831397 - 2832314 | 34773.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
