Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l19 | Rifp1Sym_dj00040 | Not Available | Positive | 2800033 - 2800377 | 12920.8 |
| exodeoxyribonuclease i | Rifp1Sym_dj00050 | Not Available | Positive | 2800501 - 2801961 | 55559.9 |
| hypothetical protein | Rifp1Sym_dj00060 | Not Available | Negative | 2802042 - 2802326 | 11022.0 |
| putative ankyrin repeat protein | Rifp1Sym_dj00070 | Not Available | Negative | 2802369 - 2803064 | 25382.0 |
| hypothetical protein | Rifp1Sym_dj00080 | Not Available | Positive | 2803082 - 2803510 | 16103.0 |
| k+ transporter, nad-binding component | Rifp1Sym_dj00090 | Not Available | Positive | 2803711 - 2805303 | 60349.9 |
| putative k+ transporter, nad-binding component | Rifp1Sym_dj00100 | Not Available | Positive | 2805300 - 2806034 | 26909.6 |
| hypothetical protein | Rifp1Sym_dj00110 | Not Available | Negative | 2806031 - 2806381 | 12640.6 |
| hypothetical protein | Rifp1Sym_dj00120 | Not Available | Positive | 2806515 - 2807423 | 33901.5 |
| hypothetical protein | Rifp1Sym_dj00130 | Not Available | Negative | 2807479 - 2808147 | 23909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
