Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | Rifp1Sym_di00070 | Not Available | Negative | 2794676 - 2795050 | 12679.2 |
| 50s ribosomal protein l10 | Rifp1Sym_di00080 | Not Available | Negative | 2795103 - 2795681 | 20788.4 |
| 50s ribosomal protein l1 | Rifp1Sym_di00090 | Not Available | Negative | 2795871 - 2796566 | 24341.6 |
| 50s ribosomal protein l11 | Rifp1Sym_di00100 | Not Available | Negative | 2796570 - 2797001 | 15027.4 |
| transcription antitermination protein nusg | Rifp1Sym_di00110 | Not Available | Negative | 2797159 - 2797692 | 20095.2 |
| preprotein translocase subunit sece | Rifp1Sym_di00120 | Not Available | Negative | 2797695 - 2798072 | 13729.2 |
| Trna-trp | Not Available | Not Available | Positive | 2798104 - 2798179 | Not Available |
| 30s ribosomal protein s16 | Rifp1Sym_dj00010 | Not Available | Positive | 2798451 - 2798702 | 9392.23 |
| ribosome maturation factor rimm | Rifp1Sym_dj00020 | Not Available | Positive | 2798752 - 2799261 | 19238.0 |
| trna (guanine-n(1)-)-methyltransferase | Rifp1Sym_dj00030 | Not Available | Positive | 2799268 - 2800029 | 28540.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
