Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate adenylyltransferase | Rifp1Sym_dh00120 | Not Available | Negative | 2777333 - 2778685 | 50574.5 |
| 1,4-alpha-glucan-branching enzyme | Rifp1Sym_dh00130 | Not Available | Positive | 2778656 - 2780161 | 57842.8 |
| 1,4-alpha-glucan-branching enzyme | Rifp1Sym_dh00140 | Not Available | Positive | 2780142 - 2780900 | 28832.0 |
| glucose-6-phosphate isomerase | Rifp1Sym_dh00150 | Not Available | Negative | 2780990 - 2782774 | 67236.0 |
| elongation factor g | Rifp1Sym_di00010 | Not Available | Negative | 2782891 - 2784984 | 76780.8 |
| 30s ribosomal protein s7 | Rifp1Sym_di00020 | Not Available | Negative | 2785027 - 2785497 | 17637.5 |
| 30s ribosomal protein s12 | Rifp1Sym_di00030 | Not Available | Negative | 2785527 - 2785901 | 13864.9 |
| dna-directed rna polymerase subunit beta-' | Rifp1Sym_di00040 | Not Available | Negative | 2786173 - 2787066 | 33304.8 |
| dna-directed rna polymerase subunit beta-' | Rifp1Sym_di00050 | Not Available | Negative | 2786990 - 2790388 | 125204.0 |
| dna-directed rna polymerase subunit beta | Rifp1Sym_di00060 | Not Available | Negative | 2790404 - 2794480 | 151143.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
