Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aspartate aminotransferase 2 | Rifp1Sym_ad00310 | Not Available | Negative | 260346 - 261503 | 41858.5 |
| putative hydrolase | Rifp1Sym_ad00320 | Not Available | Negative | 261507 - 262334 | 29931.2 |
| coproporphyrinogen iii oxidase | Rifp1Sym_ad00330 | Not Available | Positive | 262462 - 263457 | 37935.4 |
| hnh endonuclease | Rifp1Sym_ad00340 | Not Available | Positive | 263589 - 263960 | 14311.4 |
| hypothetical protein | Rifp1Sym_ad00350 | Not Available | Negative | 264044 - 264727 | 24713.9 |
| phosphocholine cytidylytransferase | Rifp1Sym_ad00360 | Not Available | Negative | 265591 - 266382 | 29713.5 |
| hypothetical protein | Rifp1Sym_ad00370 | Not Available | Negative | 267253 - 267426 | 6047.46 |
| hypothetical protein | Rifp1Sym_ad00380 | Not Available | Negative | 267434 - 268153 | 26881.1 |
| arsenite s-adenosylmethyltransferase | Rifp1Sym_ad00390 | Not Available | Negative | 268104 - 269159 | 39189.2 |
| protease htpx-like protein | Rifp1Sym_ad00400 | Not Available | Positive | 269272 - 270129 | 30422.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
