Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur oxidation protein soxx | Rifp1Sym_dd00080 | Not Available | Negative | 2708226 - 2708675 | 16130.9 |
| ribonucleoside-diphosphate reductase nrdz | Rifp1Sym_dd00090 | Not Available | Positive | 2709039 - 2710844 | 66703.9 |
| elongation factor p-like protein | Rifp1Sym_dd00100 | Not Available | Positive | 2710950 - 2711516 | 20491.4 |
| thiopurine s-methyltransferase | Rifp1Sym_dd00110 | Not Available | Negative | 2711549 - 2712217 | 24986.9 |
| small-conductance mechanosensitive channel | Rifp1Sym_dd00120 | Not Available | Negative | 2712237 - 2713337 | 41425.5 |
| succinate dehydrogenase cytochrome b558 subunit | Rifp1Sym_dd00130 | Not Available | Positive | 2713525 - 2714172 | 24424.6 |
| succinate dehydrogenase flavoprotein subunit | Rifp1Sym_dd00140 | Not Available | Positive | 2714169 - 2716055 | 69595.3 |
| succinate dehydrogenase iron-sulfur subunit | Rifp1Sym_dd00150 | Not Available | Positive | 2716052 - 2716804 | 27985.9 |
| hypothetical protein | Rifp1Sym_dd00160 | Not Available | Negative | 2716845 - 2717804 | 33612.6 |
| hypothetical protein | Rifp1Sym_dd00170 | Not Available | Negative | 2717749 - 2719002 | 44134.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
