Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, mota/tolq/exbb proton channel family protein | Rifp1Sym_dc00100 | Not Available | Negative | 2700513 - 2701868 | 49887.0 |
| protein of unknown function duf3450 | Rifp1Sym_dc00110 | Not Available | Negative | 2701865 - 2702632 | 29449.9 |
| hypothetical protein | Rifp1Sym_dc00120 | Not Available | Negative | 2702781 - 2702915 | 5123.23 |
| hypothetical protein | Rifp1Sym_dd00010 | Not Available | Negative | 2703111 - 2703638 | 19268.5 |
| hypothetical protein | Rifp1Sym_dd00020 | Not Available | Negative | 2703638 - 2704360 | 26560.1 |
| transcription elongation factor | Rifp1Sym_dd00030 | Not Available | Positive | 2704597 - 2705091 | 18912.5 |
| 2-methylcitrate dehydratase | Rifp1Sym_dd00040 | Not Available | Negative | 2705150 - 2706157 | 35926.3 |
| putative rhodanese | Rifp1Sym_dd00050 | Not Available | Negative | 2706264 - 2706929 | 23962.9 |
| putative soxxa-binding protein | Rifp1Sym_dd00060 | Not Available | Negative | 2706960 - 2707343 | 13652.9 |
| sulfur oxidation protein soxa | Rifp1Sym_dd00070 | Not Available | Negative | 2707359 - 2708204 | 31805.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
