Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase 1 | Rifp1Sym_db00100 | Not Available | Negative | 2683915 - 2684523 | 22869.5 |
| carbonic anhydrase 2 | Rifp1Sym_db00110 | Not Available | Negative | 2685177 - 2685908 | 26852.8 |
| peptide synthase | Rifp1Sym_dc00020 | Not Available | Positive | 2689882 - 2692725 | 104823.0 |
| chemotaxis sensory transducer | Rifp1Sym_dc00030 | Not Available | Positive | 2692628 - 2694112 | 55073.0 |
| tonb-dependent copper receptor | Rifp1Sym_dc00040 | Not Available | Negative | 2694374 - 2696482 | 76008.6 |
| sodium/hydrogen exchanger | Rifp1Sym_dc00050 | Not Available | Negative | 2696666 - 2697835 | 41293.7 |
| tpr repeat-containing protein | Rifp1Sym_dc00060 | Not Available | Negative | 2697872 - 2699071 | 45518.3 |
| ferric siderophore transport system, periplasmic binding protein tonb | Rifp1Sym_dc00070 | Not Available | Negative | 2699068 - 2699694 | 22690.6 |
| biopolymer transport protein exbd | Rifp1Sym_dc00080 | Not Available | Negative | 2699691 - 2700104 | 14815.9 |
| ferric siderophore transport system, biopolymer transport protein exbb | Rifp1Sym_dc00090 | Not Available | Negative | 2700104 - 2700529 | 15636.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
