Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding factor a | Rifp1Sym_cy00070 | Not Available | Positive | 2620360 - 2620728 | 13635.5 |
| trna pseudouridine synthase b | Rifp1Sym_cy00080 | Not Available | Positive | 2620810 - 2621733 | 34048.9 |
| 30s ribosomal protein s15 | Rifp1Sym_cy00090 | Not Available | Positive | 2621868 - 2622182 | 12253.8 |
| polyribonucleotide nucleotidyltransferase | Rifp1Sym_cy00100 | Not Available | Positive | 2622305 - 2622814 | 17964.6 |
| polyribonucleotide nucleotidyltransferase | Rifp1Sym_cy00110 | Not Available | Positive | 2622811 - 2624316 | 54061.1 |
| hypothetical protein | Rifp1Sym_cy00120 | Not Available | Negative | 2624384 - 2624935 | 19649.2 |
| putative aldehyde-dehydrogenase-like protein | Rifp1Sym_cy00130 | Not Available | Positive | 2625060 - 2626592 | 55451.0 |
| hypothetical protein | Rifp1Sym_cy00140 | Not Available | Positive | 2626668 - 2627249 | 21450.1 |
| hypothetical protein | Rifp1Sym_cy00150 | Not Available | Positive | 2627256 - 2627798 | 20356.1 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | Rifp1Sym_cy00160 | Not Available | Negative | 2628224 - 2629546 | 47981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
