Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | Rifp1Sym_cx00060 | Not Available | Positive | 2598539 - 2599960 | 52637.7 |
| alanine racemase | Rifp1Sym_cx00070 | Not Available | Positive | 2599957 - 2601063 | 39570.8 |
| dna repair protein rada | Rifp1Sym_cx00080 | Not Available | Positive | 2601020 - 2601568 | 18988.7 |
| dna repair protein rada | Rifp1Sym_cx00090 | Not Available | Positive | 2601565 - 2602422 | 30836.7 |
| putative pilz-domain signaling protein | Rifp1Sym_cx00100 | Not Available | Negative | 2602429 - 2602788 | 13964.8 |
| fha domain containing protein | Rifp1Sym_cx00110 | Not Available | Negative | 2602807 - 2603442 | 23370.9 |
| putative mg2+ and co2+ transporter corb | Rifp1Sym_cx00120 | Not Available | Negative | 2603782 - 2605074 | 47565.3 |
| dna-binding regulatory protein for nitrogen fixation | Rifp1Sym_cx00130 | Not Available | Positive | 2605515 - 2606987 | 55017.1 |
| signal transduction histidine-protein kinase atos | Rifp1Sym_cx00140 | Not Available | Positive | 2607106 - 2608341 | 45067.9 |
| acetoacetate metabolism regulatory protein atoc | Rifp1Sym_cx00150 | Not Available | Positive | 2608257 - 2609684 | 52361.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
