Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nitrogen regulatory protein p-ii | Rifp1Sym_cw00120 | Not Available | Positive | 2584360 - 2584773 | 14794.6 |
| hypothetical protein | Rifp1Sym_cw00130 | Not Available | Positive | 2584770 - 2585177 | 15511.1 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | Rifp1Sym_cw00140 | Not Available | Positive | 2585182 - 2585739 | 20979.5 |
| hypothetical protein | Rifp1Sym_cw00150 | Not Available | Negative | 2585746 - 2586432 | 24629.5 |
| general secretion pathway protein a | Rifp1Sym_cw00160 | Not Available | Negative | 2586434 - 2587336 | 33171.9 |
| general secretion pathway protein a | Rifp1Sym_cw00170 | Not Available | Negative | 2587383 - 2588102 | 27003.8 |
| hypothetical protein | Rifp1Sym_cw00180 | Not Available | Negative | 2588112 - 2588528 | 15417.5 |
| hypothetical protein | Rifp1Sym_cw00190 | Not Available | Positive | 2588555 - 2588986 | 15560.8 |
| rhodanese family sulfurtransferase | Rifp1Sym_cw00200 | Not Available | Positive | 2589008 - 2589964 | 34966.9 |
| hypothetical protein | Rifp1Sym_cw00210 | Not Available | Positive | 2589967 - 2590236 | 9889.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
