Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acyl-carrier-protein synthase ii | Rifp1Sym_cu00040 | Not Available | Negative | 2540474 - 2541685 | 42299.6 |
| hypothetical protein | Rifp1Sym_cu00050 | Not Available | Negative | 2541682 - 2541939 | 9310.17 |
| sensory/regulatory protein rpfc | Rifp1Sym_cu00060 | Not Available | Positive | 2542196 - 2544730 | 94190.4 |
| enoyl-coa hydratase/isomerase | Rifp1Sym_cu00070 | Not Available | Negative | 2544727 - 2545623 | 33291.8 |
| hypothetical protein | Rifp1Sym_cu00080 | Not Available | Negative | 2545857 - 2546012 | 5357.39 |
| putative molybdopterin-guanine dinucleotide biosynthesis protein | Rifp1Sym_cu00090 | Not Available | Positive | 2546112 - 2546477 | 13773.5 |
| atp-dependent rna helicase hrpb | Rifp1Sym_cu00100 | Not Available | Negative | 2546474 - 2548990 | 92140.8 |
| hypothetical protein | Rifp1Sym_cu00110 | Not Available | Negative | 2549048 - 2549545 | 17271.0 |
| atpase involved in dna repair | Rifp1Sym_cu00120 | Not Available | Negative | 2549588 - 2551438 | 68982.8 |
| hypothetical protein | Rifp1Sym_cu00130 | Not Available | Negative | 2551435 - 2551632 | 7594.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
