Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_cs00010 | Not Available | Positive | 2496689 - 2496889 | 7089.37 |
| hypothetical protein | Rifp1Sym_cs00020 | Not Available | Negative | 2496867 - 2496986 | 4171.39 |
| cytochrome c5530 family protein | Rifp1Sym_cs00030 | Not Available | Positive | 2497024 - 2498802 | 62653.5 |
| hypothetical protein | Rifp1Sym_cs00040 | Not Available | Positive | 2498972 - 2500426 | 53133.5 |
| hypothetical protein | Rifp1Sym_cs00050 | Not Available | Positive | 2500423 - 2501373 | 36117.3 |
| two domain sensory box histidine kinase (pas/pac domain/ggdef domain protein) | Rifp1Sym_cs00060 | Not Available | Positive | 2501498 - 2503609 | 79422.3 |
| putative signaling protein | Rifp1Sym_cs00070 | Not Available | Positive | 2503522 - 2505936 | 91471.8 |
| putative glutamate synthase (nadph) small subunit | Rifp1Sym_cs00080 | Not Available | Positive | 2506135 - 2507796 | 60894.7 |
| pyruvate-flavodoxin oxidoreductase | Rifp1Sym_cs00090 | Not Available | Positive | 2507800 - 2511375 | 131434.0 |
| hypothetical protein | Rifp1Sym_cs00100 | Not Available | Positive | 2511315 - 2512565 | 47524.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
