Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase yddv | Rifp1Sym_cr00010 | Not Available | Positive | 2476939 - 2477886 | 35178.9 |
| putative endonuclease | Rifp1Sym_cr00020 | Not Available | Negative | 2477890 - 2478579 | 26034.5 |
| ribosomal large subunit pseudouridine synthase b | Rifp1Sym_cr00030 | Not Available | Negative | 2478552 - 2479448 | 34149.1 |
| putative segregation and condensation protein b | Rifp1Sym_cr00040 | Not Available | Negative | 2479445 - 2480155 | 26137.7 |
| segregation and condensation protein a | Rifp1Sym_cr00050 | Not Available | Negative | 2480169 - 2480987 | 31466.8 |
| tryptophanyl-trna synthetase | Rifp1Sym_cr00060 | Not Available | Negative | 2480996 - 2482213 | 45706.7 |
| peptidase, m50 family | Rifp1Sym_cr00070 | Not Available | Negative | 2482216 - 2482926 | 25773.2 |
| sua5/ycio/yrdc/ywlc family protein | Rifp1Sym_cr00080 | Not Available | Negative | 2482934 - 2483560 | 23326.3 |
| putative metal-dependent phosphoesterase | Rifp1Sym_cr00090 | Not Available | Negative | 2483570 - 2484487 | 32915.3 |
| hypothetical protein | Rifp1Sym_cr00100 | Not Available | Positive | 2484429 - 2485322 | 33119.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
