Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase | Rifp1Sym_cq00150 | Not Available | Positive | 2470592 - 2471182 | 21631.8 |
| imidazole glycerol phosphate synthase subunit hish | Rifp1Sym_cq00160 | Not Available | Positive | 2471215 - 2471856 | 23388.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | Rifp1Sym_cq00170 | Not Available | Positive | 2471860 - 2472594 | 25738.8 |
| imidazole glycerol phosphate synthase subunit hisf | Rifp1Sym_cq00180 | Not Available | Positive | 2472608 - 2473378 | 27469.8 |
| phosphoribosyl-amp cyclohydrolase | Rifp1Sym_cq00190 | Not Available | Positive | 2473378 - 2473761 | 14604.4 |
| phosphoribosyl-atp pyrophosphatase | Rifp1Sym_cq00200 | Not Available | Positive | 2473771 - 2474088 | 11654.0 |
| twin-arginine translocation protein tata | Rifp1Sym_cq00210 | Not Available | Positive | 2474249 - 2474518 | 9704.93 |
| twin-arginine translocation protein tatb | Rifp1Sym_cq00220 | Not Available | Positive | 2474559 - 2474897 | 12752.5 |
| sec-independent protein translocase, tatc subunit | Rifp1Sym_cq00230 | Not Available | Positive | 2474912 - 2476003 | 40488.3 |
| pentapeptide repeat protein | Rifp1Sym_cq00240 | Not Available | Negative | 2476021 - 2476359 | 12769.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
