Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative formylglycine-generating sulfatase | Rifp1Sym_co00150 | Not Available | Negative | 2427440 - 2430394 | 109703.0 |
| putative serine/threonine-protein kinase | Rifp1Sym_co00160 | Not Available | Negative | 2430481 - 2431755 | 45834.7 |
| serine/threonine protein phosphatase | Rifp1Sym_co00170 | Not Available | Negative | 2431752 - 2432072 | 11441.5 |
| protein phosphatase impm | Rifp1Sym_co00180 | Not Available | Negative | 2432506 - 2433066 | 20162.8 |
| protein kinase | Rifp1Sym_co00190 | Not Available | Negative | 2433230 - 2434036 | 29625.4 |
| serine/threonine protein kinase | Rifp1Sym_co00200 | Not Available | Negative | 2434407 - 2434697 | 10491.5 |
| hemerythrin family protein | Rifp1Sym_cp00010 | Not Available | Positive | 2434974 - 2435657 | 26278.6 |
| cytochrome cd1 nitrite reductase | Rifp1Sym_cp00020 | Not Available | Positive | 2436282 - 2437910 | 60321.2 |
| denitrification system component nirt/cytochrome c552 | Rifp1Sym_cp00030 | Not Available | Positive | 2438008 - 2440839 | 104504.0 |
| copper binding protein, plastocyanin/azurin family | Rifp1Sym_cp00040 | Not Available | Positive | 2440844 - 2441200 | 13414.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
