Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_cn00130 | Not Available | Positive | 2407900 - 2408115 | 8134.76 |
| protein of unknown function duf1631 | Rifp1Sym_cn00140 | Not Available | Positive | 2408366 - 2410777 | 90149.4 |
| hypothetical protein | Rifp1Sym_cn00150 | Not Available | Negative | 2410736 - 2411143 | 14725.5 |
| glycosyl transferase, family 2 | Rifp1Sym_cn00160 | Not Available | Positive | 2411143 - 2412156 | 38810.5 |
| lytic transglycosylase, catalytic | Rifp1Sym_cn00170 | Not Available | Negative | 2412163 - 2412807 | 23903.3 |
| sec-c motif domain protein | Rifp1Sym_cn00180 | Not Available | Negative | 2412964 - 2413452 | 18315.5 |
| hypothetical protein | Rifp1Sym_cn00190 | Not Available | Negative | 2413693 - 2413806 | 4574.63 |
| glycosyl transferase, family 2 | Rifp1Sym_co00010 | Not Available | Positive | 2413911 - 2414375 | 18084.3 |
| nad-dependent epimerase/dehydratase | Rifp1Sym_co00020 | Not Available | Positive | 2414341 - 2415225 | 33293.6 |
| translation initiation factor if-3 | Rifp1Sym_co00040 | Not Available | Positive | 2417659 - 2418117 | 17071.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
